Wang et al., 2026, Bilaterian AMPA Receptors, J Gen Physiol, iGluR alignment

Wang et al., 2026, Bilaterian AMPA Receptors, J Gen Physiol, iGluR tree

Wang et al., 2026, Bilaterian AMPA Receptors, J Gen Physiol, TARP alignment

Wang et al., 2026, Bilaterian AMPA Receptors, J Gen Physiol, TARP tree

Trimmed amino acid sequence alignment (FASTA format, 672 amino acid positions)
of 388 bilaterian and cnidarian iGluR sequences.

Maximum likelihood tree of 388 bilaterian and cnidarian iGluR sequences.

Trimmed amino acid sequence alignment (FASTA format, 232 amino acid positions)
of 70 TARP sequences.

Maximum likelihood tree of 70 TARP sequences.

Amino acid sequence alignment (FASTA format) of 458 animal iGluR sequences and two plant GLR sequences. From “Molecular determinants of ligand selectivity in diverse ionotropic glutamate receptors” by Wang et al.

FastTree (Newick format) of 458 animal iGluR sequences and two plant GLR sequences. From “Molecular determinants of ligand selectivity in diverse ionotropic glutamate receptors” by Wang et al. First file without support values; second file with SH-aLRT and Ultrafast Bootstrap branch support values.

2023

 

Amino acid sequence alignment (FASTA format) of 203 animal iGluR sequences and one plant iGluR sequence. From “Constitutive activity of ionotropic glutamate receptors via hydrophobic substitutions in the ligand-binding domain” by Sintsova et al.

FastTree (Newick format) of 203 animal iGluR sequences and one plant iGluR sequence. From “Constitutive activity of ionotropic glutamate receptors via hydrophobic substitutions in the ligand-binding domain” by Sintsova et al.

Alignment of 700 DEG/ENaC sequences. From “Peripheral and central employment of acid-sensing ion channels during early bilaterian evolution” by Martí-Solans et al. FASTA format.

2022

 

Alignment of 544 DEG/ENaC sequences. From “Molecular determinants of neuropeptide sensitivity in the FMRFamide-gated sodium channel family” by Dandamudi et al. FASTA format.

PhyML tree (VT+G via Smart Model Selection at http://www.atgc-montpellier.fr) of 544 DEG/ENaC sequences. From “Molecular determinants of neuropeptide sensitivity in the FMRFamide-gated sodium channel family” by Dandamudi et al. Newick format.